rs252001594 SNP Detail

Summary

• ID
  rs252001594
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152448515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGCCACTG ACACACACAG
  CAGGACAGTC CTACGGACAC ACACAGCAGG ACAGTGCCCC AGACACACAG TAGGACGATC
  CCACAGATAC ACAGTAGGAC GATGCCACAG ACACACACAT GAAGGGAAAC ACACTGAGTT
  GTGTGTAAGC TTACACAAAG TGGGATCTCG GCTGGGTCCC GGTTAGGGAC TGAGGTCAGC
  G
  GGATGATTCT GGGAGCCAAG CAGGTCCAAG AAAGGATTAG TGTTAGTGAG CTGTCACAGT
  CCCAAGAGAC ACACACACAA GAATATACTC AGCATGGGGT GGGCATGGCG GTGCATACCT
  CTGATCCCAG TACTTGGGCT GCAGAGACAG ACTGATCTCT GTGAGTTCAA GAGCAGCCTG
  ATCTACACAG CAAGCTCCAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434332	CHEV_4_151738167	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs252001594					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152448515 () rs orientation: forward

Symbol	Name	Function Class
Chd5	chromodomain helicase DNA binding protein 5	Intron
Rr605861	regulatory region 605861	1222 bp proximal