rs251981838 SNP Detail

Summary

• ID
  rs251981838
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137397000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCATATCCA AAACCAAAAG CCCAATAAAT
  AAAGACCCGG GATAAGAGTT ATAAAGAGTC CAAATCCAAT CAAAGCAGGA GTGGTAGGTA
  GCAAGCACTT TGGGATGGAA AGTCAGGGGG ATCTTGAGTT CAAGGCCATG TGGAGATCAC
  R
  TCTAAAACAA TGAAAAATGC TGGACTTGgg ggctggtgag atggctcagt ggttaagagc
  actgactgct cttccaaagg tcctgagttc aaatcccagc aaccacatgg tggctcacaa
  ccatccctaa caaaatctga tgcccccttc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321366203	CHEV_4_137225604	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251981838					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137397000 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rap1gap	Rap1 GTPase-activating protein			Intron
				Noncoding-Transcript-Variant
Rr602671	regulatory region 602671			1512 bp distal
Rr602672	regulatory region 602672			1068 bp distal