rs251953527 SNP Detail

Summary

• ID
  rs251953527
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52706519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTTTCTT TATAATGTCA
  AAGTTTCCTG TCAAATTCTT CTCGGGTGAG ATTAGACTTC TTCTGAGCTC TTAGGTTCCA
  GTAGCATGCT GTCAAAGAGT TCCCACTGGA AGGTGCACTT GGCGCCACCT CTTCCTGTGC
  GCCCTCGCTT TCTGCAATGC ATTGTGGGTA TCATTGTGGC TTACTGCATA TACTTTGCAG
  G
  ATTAGCCCTA AGTGTTTTGT GATGGTTGGT TAATTAAAAC TGTATCATCT AATCCTCGTG
  TCCTTTCACA AAGCCACTTG TAAATGTTGC AGATTGTCCA TGCTGAAAAC CACCGAGTCA
  AGAGGATCCT TGACTCTGGG CGGAAGTGAT CCTCTCCTTT TATGTAACTT CTGACACGCA
  GACTCTTCGG AGATAATACG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765234	CHEV_3_52603020	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251953527					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52706519 () rs orientation: forward

Symbol	Name	Function Class
Gm30292	predicted gene, 30292	1314 bp upstream
Rr576585	regulatory region 576585	961 bp distal
Rr576586	regulatory region 576586	1532 bp proximal