rs251848458 SNP Detail

Summary

• ID
  rs251848458
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:73071505 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAACT TATCTGAAGA CTGGCAGAGG
  Y
  CCAGGAGAGC CAGGCAGCAC TGGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322260060	CHEV_7_80566643	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251848458					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:73071505 () rs orientation: forward

Symbol	Name	Function Class
Gm44645	predicted gene 44645	493 bp upstream
Rgma	repulsive guidance molecule family member A	1858 bp downstream
Rr380947	regulatory region 380947	1568 bp upstream
Rr648938	regulatory region 648938	1941 bp distal
Rr648940	regulatory region 648940	within coordinates
Rr648941	regulatory region 648941	299 bp proximal
Rr648942	regulatory region 648942	541 bp proximal
Rr648943	regulatory region 648943	894 bp proximal
Tssr72937	transcription start site region 72937	782 bp downstream