rs251844725 SNP Detail

Summary

• ID
  rs251844725
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19372286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCAAGATA GGGAGAGCCT
  AATATCCAGA AGCAGGGCAG GCAGGCAAGC TCAGGCCACT GAAGGCCCTT GTTGGCCTGT
  TGGAGGACTT GTGTTTTCTT CTGAACTATA ATGGAAAGCC AGTGCAATAT TTACATCTGT
  GCTTTGCAAC AAACTGGCAT TCATATCTAA TTTATATATG TTTTAAAATG TCTCTGGCTA
  Y
  AGCTTTATAG ACAGTGGTTT CAAAATGGAA ATCTGAAGCA AGGAAATCTT CCTAATAGTT
  TTAAATATCC TGAAGGAGAG ATGAGAGATG AGAGATGATG GTGCCTTCAA GTTTTTCAGG
  CTGCATTATG CAAATTTATA TAGTGTATAT GCACAGATAA AGATCCAACA GTCCAAACGC
  CATCCTCCTT TCAAGTTTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320678410	CHEV_3_19218122	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251844725					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19372286 () rs orientation: forward

Symbol	Name	Function Class
Gm66414	predicted gene, 66414	1312 bp downstream
Rr573974	regulatory region 573974	840 bp proximal