rs251745435 SNP Detail

Summary

• ID
  rs251745435
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132253337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGACCTGTC TCACACACAC
  ACACACACAC ACACACACAC ACACACACCC ACACACACAA CCTAGGGTTT TGTTTTTTTT
  TCTGTTCTTT TTAACCTAGA ACATTAGAAT ATGTAACAAT GTTTATAGGG CCCAGGGCTC
  TCTCTGTAAG AATTGGGCAA AGAAACCTGG GCGGTGGTGT AAGAATTGGG CAAAGAAACC
  W
  GGGCGGTGGT GACGCACGCC TTTAATTCCA ACACTTGGGA GGCAGATGCA GGCGGATTTC
  TGAGTTTGAG GCCAACCTGA TCTACAAAGT GAGTTCCAGG ACAGCCAGGG CTATACAGGG
  AAACCCTGTC TCGAAAAACA AAAGACAAAA ACCAAAACAA AACACAGATG CTACCCTTAA
  AATAGAGTAT ACCTCTTGGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321334103	CHEV_4_132081941	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251745435					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132253337 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
Rr377208	regulatory region 377208	606 bp downstream
Rr377209	regulatory region 377209	1122 bp upstream
Rr601000	regulatory region 601000	867 bp distal
Rr601001	regulatory region 601001	754 bp proximal
Rr601002	regulatory region 601002	846 bp proximal