rs251618954 SNP Detail

Summary

• ID
  rs251618954
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:91861095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCAGTGATT GCTGCTAGCT CTTGGCTCCG CCAAGCGTCA
  GCCGGTATCC AGGCCTGGAC TCTGAGCCAC TGGCTGGAGA GGGAGGTCTG CAGCTCCCTG
  R
  TGGGAGTGAT GGGATTTATT AATCAACTTG CTTAGGAGAC AATAAGTGAC ACAGAGTAGA
  ATTTAGCTGA GGTAGTGCTA CCTTTACAAT AAATCCAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322789580	CHEV_8_93658366	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251618954					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91861095 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Aktip	AKT interacting protein			Intron
				Noncoding-Transcript-Variant
				Splice-Site
Gm63829	predicted gene, 63829			1039 bp downstream
Rr368579	regulatory region 368579			84 bp downstream
Rr667489	regulatory region 667489			481 bp distal
Rr667490	regulatory region 667490			within coordinates
Rr667491	regulatory region 667491			805 bp proximal
Rr667492	regulatory region 667492			1215 bp proximal
Tssr82405	transcription start site region 82405			445 bp upstream
Tssr82406	transcription start site region 82406			429 bp upstream
Tssr82407	transcription start site region 82407			1192 bp downstream
Tssr82408	transcription start site region 82408			1220 bp downstream
Tssr82409	transcription start site region 82409			1235 bp downstream