rs251441566 SNP Detail

Summary

• ID
  rs251441566
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98129327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCCATTCA AGAAGAAACT
  GTATATTAAG CTAAGCATGA AAATTCTGCT TTTCTAGCGA TTCTTTTCCC CCCAAAAAAG
  AAATTACTTT TCAAGACATT GGGGTAAGCT AGAACTTTCT GAATAGAACA GCAATAATAG
  CACAAGAAGT AGCTCCAAGA ATCAACATAT GGGGCTACAT GAAATTTAAA AGTCTCCTTT
  Y
  GGCAAAGAAC GCTATCAATG GAGCACCCAG ACAGTCCACA GGAGAGACCA TCTTTACCAG
  CCATACTTCA GACATTGAGC TGACACACAG GACTGCAGAA CTTAAATACC AAGGAAATAA
  AAGGGCCAAT CAACAACTAG GCTAATGAAT TGAGTCCACA GTTAAAACAA AAACAAAAGG
  CACAAATGAC TAGTAACTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321220424	CHEV_4_97907781	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251441566					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98129327 () rs orientation: forward

Symbol	Name	Function Class
Gm70434	predicted gene, 70434	within coordinates
Rr406792	regulatory region 406792	1292 bp proximal
Rr595713	regulatory region 595713	439 bp distal