rs251407686 SNP Detail

Summary

• ID
  rs251407686
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143746325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTATCTTAA AAAACAAAAA
  ACAAAAACAA AAACAAAAAA TAAAAAACTA ATCAATCAAA CAACAGCTAT TATGTCTAGT
  GCCCGAGTCT TAGAGTTTAT AAATGAAAAT CTGTCCGTCT TCATGTGGCT AGCATAAAAT
  ACAAATTACT AAGACCAGGT TAAACTCTCA ATAATATTTT TTAAATATTT ATTTTAACTA
  K
  TCTGGTGCTG AGGATTGAAT CCCAGGTCTG CCTGACATGA GCTAAACGTG ACCTCTTCCA
  CTGAGTTCCA TCTCCATTCT CAATGAAGCA GCCACAGCAG CAGCACTCAA CCTGTGGGCA
  GTGACCCCTT TTGTTGCAGG GATCGCTAGG ACCATCAGAA AACACAGATA TTTACATCAT
  GGTAGAAAAA TCACAGTTAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320535027	CHEV_2_143730141	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251407686					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143746325 () rs orientation: forward

Symbol	Name	Function Class
Rr566332	regulatory region 566332	249 bp distal
Rr566333	regulatory region 566333	667 bp proximal