rs251257678 SNP Detail

Summary

• ID
  rs251257678
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106644335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTAGAAAG AGAAGAAAGA
  CAAAGTTTGC GGTGATTGGC AAGAGATCTG TGACCAAGCC CCACAGGTTC TTGGTACTCT
  GGATGTGGCC CTGCCTCTGG TTTGCTGGAG AACCGAGCAT AACTTAAGCT ACTCTGGACC
  TCAGTCTTCA CAACTATAAA ATGGGAACAT GAGCGTCACA GAAAGGAGTC TGAGTGCTTA
  R
  ACCGGGACCT GACCCACAGG AAGTGCCCCA AACTGCTGTG CTTTGTGTTG TCCAAAAGCT
  AAGGCACTTC AGAAAGACAC GGGTCCCAGG GGTATGTGAC ATCTATGGAG AACAAATGGC
  CAGGTGGCCT GTGCAGAAAA TGCTTTGAAG GCAGCTGGGA CCTGTGACAA AAACATTCAC
  ATTTCTTTCC ATTACTGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321247228	CHEV_4_106459743	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251257678					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106644335 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596808	regulatory region 596808	313 bp distal
Rr596809	regulatory region 596809	404 bp proximal
Rr596810	regulatory region 596810	415 bp proximal