rs251246596 SNP Detail

Summary

• ID
  rs251246596
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:5439521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTATTTTTA TAAACAAATA
  GTCATTATTT TTTGTTCAGC AAACATTTGC TATTGTAAAG CTTCACACCT CCACATTTAG
  CAACATGTTC CCATATGCGG TTGTGACTCA CTGCTTAAGA AGCTGGGGCT TGCAGTGGTC
  TGAAGGAGAA AAGTCCCCCA ATAGACTCAT GTGTTTGATT ACTTGGTCCT TTGCCTGGTG
  R
  TCATGTTTGG GGAGGTTTTG GGACCTTTAG AAGTGGAAGT CTTGCTGAGG ATGTACAATA
  CTGGAGGTAG GTTTTAAGGG CTTATAGCCT TACCTCACTT CCTGTTCTCT CTCGCTCACT
  TGCTCCCCCT CTCCCTCCCT TCCTCCTTTC CTCCTTTCTT CTTTTCTTCT TTTCCCCTCT
  CCCTCTCTGC TACCTATGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321729116	CHEV_6_5389521	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251246596					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:5439521 () rs orientation: forward

Symbol	Name	Function Class
Rr626148	regulatory region 626148	1441 bp distal