rs251133906 SNP Detail

Summary

• ID
  rs251133906
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101531154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTGAAGCA TTCTCAAGTC
  TTTCACCTAG GGAGGGAGTC TTGAAAGTTT TCTTCTTTAA ATGCATAAGG AAGACTAGAA
  GGCATTAGAG TTAGATTTTC CCTTAGACCA GTTAGGTTCT GATAAGGCAC CTACCTGCTG
  GTTATGTGGT TAGGTGGCCT CTCCTTGAAG ACACACCTTG TTAAGAAGAG ATCACTGTCC
  Y
  CACTCTACAA AATCTTTCCT TTCCTTCCCT GTGCTCCTTG AAAGAAACAT GAGAGGTGGG
  GGAGGGTGAC ACACCCTTCC CCCCACAGCA TTTACTCTCC TGGCCAAGCC CTTTGGGGAA
  GGATTCTCAT CTGGGTCCAC AGTGAGCGAT CAACACTCAG ATTTTTTTCC TTTTGAGTCC
  AGCAACCCAC TGGTTACAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321230903	CHEV_4_101346562	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251133906					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101531154 () rs orientation: forward

Symbol	Name	Function Class
Rr596196	regulatory region 596196	807 bp proximal
Rr596197	regulatory region 596197	1710 bp proximal