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rs251084951 SNP Detail
Summary
  • ID
    rs251084951
  • Variation Type
    SNP
  • Alleles
    C
Genome Location and Flanking Sequence
  • Location
    Chr4:136022831 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AAGATACTTT AATATCTGGC
    AGTAAGATGG CTCAAAGGGT AGAGGGGCTT GCCACCAAAC CTGGCCACCT GAGTTTGAAT
    CCCTGAACCC CTGAGTGTGA CAGTGTGAGA ACAGGTTCCC ACTTGTCACT GTTCCATCCC
    TCACACATGT AATAAACTTT TTAAGACTTA AGCTGTTTCT TGCTAGGCAT GGTGCCATAG
    C
    AGACCAGGGC TTTGGGACTA GGCTGGGCAA CATTGAAAGA CTCCGATGGC TTGGTGGTCA
    AGAGCACTGG CCGCTCTTCT AGAGCACCTG GGTTTGATTT CTAGCACCCC TATGGCACTT
    CCAAACCATC TATAACTCCA GTCCTAGGGG ATTGGATGTC CTCTGGTACT GTTTGTGGTG
    GACAAACACA CATTAGGCAA                                            
    
    C = C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
AKR/J
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
DBA/2J
FVB/NJ
I/LnJ
LEWES/EiJ
LG/J
MA/MyJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
ss363388138 MGP_WTSI_4_135851435 EVA_MGPV3 EVA_MGPV3 f SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP Consensus Information
SNP Consensus Type
A/J
AKR/J
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
DBA/2J
FVB/NJ
I/LnJ
LEWES/EiJ
LG/J
MA/MyJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251084951 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss363388138 MGP_WTSI_4_135851435 SC_MOUSE_GENOMES SC_MOUSE_GENOMES f SNP C/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:136022831 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr602345 regulatory region 602345 1304 bp proximal
Zfp46 zinc finger protein 46 1578 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory