rs251080489 SNP Detail

Summary

• ID
  rs251080489
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:6342673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCAACGTGA AACTTTTTGA AAGTAATTTG
  AAATAGTAAA GAAAAGAGAC TAATTTAATT GGTCATCATA ATAATTCATA TTTTTCAAGC
  TATAAAGAAA AGCAATATTA TGATCATGGA AGAACCCTTT ATATTAAATT CTTCATTTTT
  Y
  CCTATGAGCT AAGAAAAAAT ACAGCGTGCT TATGTCTTCT CAGTAGAGCA ATGGGCAAGA
  AAAGGAAATA CCAAAACATT GGAAACCCTA ACATatatag gaatcaagag ttcaggggag
  agctctgatt gaagtgtaca cttggaaCAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324226969	CHEV_13_6291883	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251080489					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:6342673 () rs orientation: forward

Symbol	Name	Function Class
Rr474569	regulatory region 474569	312 bp distal