rs251072142 SNP Detail

Summary

• ID
  rs251072142
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121663027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTGTTTGTT TGTTTTTTAA TAACAGGTTT CTCTGTGTAG
  CCTTGGCTCT CCTGAAACTC ATTCTGTAGA CCAGGCTGGT TTTGAACTCA GAGAGATCCA
  Y
  CTGCCTCTGC TTCCCAAATA CTGGAATTAA AGGCATGCGC CACCACTGCT GCCTCTGCCT
  GCTGCCATCC CCACCACCCA GTGCTTAAAG GTTTCTTAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320906536	CHEV_3_121572296	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs251072142					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121663027 () rs orientation: forward

Symbol	Name	Function Class
Gm65477	predicted gene, 65477	within coordinates
Rr584187	regulatory region 584187	1589 bp distal
Rr584188	regulatory region 584188	350 bp proximal
Rr584189	regulatory region 584189	1410 bp proximal