rs251068537 SNP Detail

Summary

• ID
  rs251068537
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:51356337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTCTGTG TGCAGAAAAC
  TCCAACCAGC AGCATAAAAA TGTAAAATAA GACTTAAAAT ATATAGTCAC TTTTACTTTG
  TTTTCACATT ACTCTGCACT ACAATCCCAG ATATCACATG TGTCATACTA TCTCTTTTTC
  TGCTGAGGAA TGGAACAGAA ACTGAGTCTG TGAGTAAAAC TCCTCTGTGA AGAATCAGGA
  K
  GTCAGAGTTG CAGTGTGGAA TAGCACACAT AACACACACA CACACATACA CACACACACA
  CATACATACA CACAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGG GGGAGAGAGG GAGAGAGAGA GAGAGAGAAA TAGTGAGAAA GACAGAGAAT
  GTGATAAGGG AGAGTGAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	LG/J	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss380379549	MGP_WTSI_10_51200047	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	LG/J	LP/J	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs251068537					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss380379549	MGP_WTSI_10_51200047	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:51356337 () rs orientation: forward

Symbol	Name	Function Class
Gm49339	predicted gene, 49339	371 bp upstream
Lilrb4b	leukocyte immunoglobulin-like receptor, subfamily B, member 4B	420 bp upstream
Rr431273	regulatory region 431273	232 bp proximal
Tssr93232	transcription start site region 93232	within coordinates
Tssr93233	transcription start site region 93233	572 bp upstream
Tssr93234	transcription start site region 93234	598 bp upstream
Tssr93235	transcription start site region 93235	891 bp upstream
Tssr93236	transcription start site region 93236	1377 bp upstream
Tssr93237	transcription start site region 93237	1416 bp upstream
Tssr93238	transcription start site region 93238	1440 bp upstream
Tssr93239	transcription start site region 93239	1465 bp upstream
Tssr93240	transcription start site region 93240	1482 bp upstream
Tssr93241	transcription start site region 93241	1504 bp upstream
Tssr93242	transcription start site region 93242	1544 bp upstream
Tssr97553	transcription start site region 97553	193 bp downstream