rs250911535 SNP Detail

Summary

• ID
  rs250911535
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37781067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTCTTTA AAGAGAACAT
  GGCTAGAGAT TGACAGGTAG TGAGGGTCTC TGTGTTAGGC ATGGTCCTTA GAACTCTGGA
  CTGGATTCAT TTATTTGGTA GCAATGAGTG AAGCACTGGG GGCTGGATGG AGGGAATGAA
  GACTTGGACT GCAGGGACCA TGGCTGGAAG GGAAGAGTCT GACAAGGTTT GCTAGCTGAA
  Y
  TGAGAAATCG GGAACAGTGC CAAAGGTAGA TGGTGATGTC ATTAGTTGAC ATTAGCAAGG
  AAGATCCTGG ATTAGGAGTC AGACTTGCTG ACTGTGTCCA GTGGGCTGTC CTGCGGCTGG
  TGCTCAGAGC TGTTGAGGGT GGACATTTCC AATGCATACT GAACCTATTT ACATATTAAG
  AACATTCTAA TGTCTGTAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320712092	CHEV_3_37625840	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250911535					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37781067 () rs orientation: forward

Symbol	Name	Function Class
Gm36620	predicted gene, 36620	within coordinates
Rr575550	regulatory region 575550	1938 bp distal
Rr575551	regulatory region 575551	within coordinates
Rr575552	regulatory region 575552	1212 bp proximal