rs250609159 SNP Detail

Summary

• ID
  rs250609159
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137833341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTCCCCGT TAGAGTCTCG
  TTCAGGACCT ACACAGCTGT GCTTCCAAGG CTGCTCTGTG AGTTTAGTCA GGCCTGACTG
  GTAAAGTATG TGGCTTTGGT CTTAGAAGAA ATCGAAGAGT CCCAAGAAGA GCTAGGCTTG
  AGCAAACTGT GACTTGTGGC ATTGAAATTG GTTGCCCAAG TTTGAAGCTT CTTACCTTGT
  Y
  ACTGGGTGAC TTCCCAACGT AATCAGTCAC CTGTCACCGA GAGCCCAGCA GACAGAAGCA
  CCTGTTTAAG GGGATTGTTT GTTTGTTCTC ATGGCTGGAA GGTGAGAGCC CCCAGAGCCG
  ATTTACAAAT GAGCATTAGA CCAGAGGTAA GGCATGGCAG AGTAGCCAAC CGCTGACTTG
  ATTACCGCCA CAGAGCCTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321370508	CHEV_4_137661945	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250609159					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137833341 () rs orientation: forward

Symbol	Name	Function Class
Eif4g3	eukaryotic translation initiation factor 4 gamma, 3	Intron
Rr602837	regulatory region 602837	1629 bp proximal
Rr602838	regulatory region 602838	1896 bp proximal