rs250605430 SNP Detail

Summary

• ID
  rs250605430
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100691906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACATGAAGT GCGCGTCTCT
  CCTTCAGAGG TGATGAGGAA AACATCCTGG TGCTGCACTT TCGAGGGTCT TTAGGACTAG
  AGAAAACCAC CATCTTCAAG CTACTGGTTT CTCATCCTTT CCTGAACAAC TAGCTGCAGG
  CTTGACCATC GCTGAGAAAG TCTCATTTAG CTGCAGCCTT CTCACTGAGA GCCGCAGGTG
  R
  CTTTAAGAGA CGGGTCTGTG GATATTTCTA GATCTTGACC AACTTTTTTG AGACACATTC
  ACATACCATA CAGTTTGTCC ATCCACACTC AATATTTCAG TGGTTTTTAG TGTATGTAAA
  GACACAGGGA CTAACTAGGA AACACTACAA TTTACCCATC CCCTTCTTCT TTACATTCTT
  CTGTTGTAAC CAACCAGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321228035	CHEV_4_100507314	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250605430					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100691906 () rs orientation: forward

Symbol	Name	Function Class
Cachd1	cache domain containing 1	Intron
Rr596037	regulatory region 596037	980 bp distal