rs250602953 SNP Detail

Summary

• ID
  rs250602953
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102342783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTGTG TGTGCATGTG
  TACACATGCT TGTGCAAGAC AGAGCTCCAC ATTAAATGGC TTCCTTAAGA ACTCTCTGCT
  TTATTTCTCA GCACCAGGTC TATCTGCAAA CCTGGGCTTC ACCGATGTGT GTTGACGAGC
  TGGCCAGTGA GCTTTCGGGA CTTGCTTCAG TACTTCCGGT GCTGGAATTA CAGCTGTGAC
  T
  CTGCACTTAC TTTTTCACAG AGGTGCTTCA GCTCCAGAGT CTGATCTCTG TGTTTTCACA
  TAAAGAATGT ATATCCACAG GGCTATGTCT CCATTTCTCC AGTATAGTTA AGAATTGTCT
  TGGTCATAGT TGATGTGAAT CTCTTGCTGC GACTGATTTG CAAACTTTAT CACCAGTGTG
  TCTATATAGG AAGAAACAGC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321233797	CHEV_4_102158191	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250602953					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102342783 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pde4b	phosphodiesterase 4B, cAMP specific			Intron
				Noncoding-Transcript-Variant
Rr596250	regulatory region 596250			1889 bp distal
Rr596251	regulatory region 596251			515 bp distal
Rr596252	regulatory region 596252			568 bp distal
Rr596253	regulatory region 596253			383 bp distal
Rr596254	regulatory region 596254			586 bp proximal
Rr596255	regulatory region 596255			681 bp proximal