rs250450234 SNP Detail

Summary

• ID
  rs250450234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:96594358 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGGAGAAG CTCATATTAG
  GCAGTGGAGA CTCCTACGTT TTAAAGCCAA CATAGTCATT CAATTCTAAT TAAAACATTT
  AAGACCTGTA TGACCTCGGT TGGCACCTCA GAGTATCAAT TTTAGTCATT GCAACTTATC
  TGTTATTTAG TTACAGACAT CTCCTCACTG GACACCTTCT TTGTCCCCAA CATAATTCCA
  R
  CTGCTATAAA TTAGTCAATA CAGATCCCTG CTTCTCACTG AGTTTATCTT TTGACACTTT
  TAGTGCTATT AAGTAACTAT AAAAATACAA TTAAAGCCCC AGCATAACCT TTGTAGTACA
  TGCTCAGAGA AATGTTTCTT CTATTTATTT AAACTCTCAC TTGCTTTTTG TTTGTTTTCC
  AAATTCACAC ATTATTTCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320410859	CHEV_2_96604170	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250450234					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:96594358 () rs orientation: forward

Symbol	Name	Function Class
Lrrc4c	leucine rich repeat containing 4C	Intron
Rr561438	regulatory region 561438	within coordinates