rs250313856 SNP Detail

Summary

• ID
  rs250313856
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54494262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCATTAC ATCCACCGTT
  CCCTGCCTGC AGCTCTCAGT CTAGAGATGG GGCCATATGA GATTCCCCTA CCCACCTCGG
  CAAGTCAACA AGTTGTCTTT GCACAGGTCT CCGTTAGGAG ATCGTATTGG TGCAGTTCCG
  TGGGTGCAGT TCATTGTCTC ATATAAAAAA CAATCTCACA TCAGGTATCT TGATCATTGG
  R
  CTCTTACTAT CTGTAGACCC TCTCTTCTCC CATGCTCCCT GAGCCTTACT TGTAGAGGCT
  GTGTTGGAGC TGGGCACCCC AGGGTCAGCT GTCCTCTGCA TTCTGACTAC AGCTGTCTCG
  AATGATCTGC CTCCTTCAAA AGAAGAGCTC TAGATTTGAA GTGACTTGAT GTTTTGCACT
  ATGTGAGAGG ACGTTCTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320772023	CHEV_3_54390763	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250313856					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54494262 () rs orientation: forward

Symbol	Name	Function Class
Gm40050	predicted gene, 40050	within coordinates
Rr576811	regulatory region 576811	453 bp proximal
Rr576812	regulatory region 576812	1407 bp proximal