rs250307823 SNP Detail

Summary

• ID
  rs250307823
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152062880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTGCCCTG AGTCCCAGCA
  CGGCTCTGTA GCGTGGCACA CACCGCCCTG CTCTCCTCCT TTTTGTGAGA GCAAAGGAGC
  AGAAGGCCAT GCTTAGGAGC AGGGTGCCAT GGGGTTCTCG TGACACAGGT GAGGGACCAT
  TTGAGCCCAC ATATGTTCCT AGGCAGATGT GCCCGTTTGT GGGGCAGCAC ACAGCCCTAC
  M
  CAGCTGAACG GCTTCACAAA CAATACTGGT CCTCTTCAAG AAAAGTAGGA GGTCCAGCTG
  CTCACGTCAA GTGTCTGTTT TGAGGCAGGA TCTCACAGTG TGTTCTAGAT GACACCATAC
  TTACTATGTA GCCCAGGTTA GCCTTTAAGT TCATCACTAT GTATCTCTTT ACTCCTTTTT
  TTTTTTTAAG ATTTATTTAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321433796	CHEV_4_151352532	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250307823					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152062880 () rs orientation: forward

Symbol	Name	Function Class
Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	Intron
Rr605686	regulatory region 605686	488 bp distal
Rr605687	regulatory region 605687	236 bp proximal
Rr605688	regulatory region 605688	423 bp proximal
Rr605689	regulatory region 605689	1950 bp proximal