rs250294254 SNP Detail

Summary

• ID
  rs250294254
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101856476 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGGGGGCA TAAAGAGGGT
  GATTCTCTGC TTTTATTTAT TTTTTCTTCT CTTCCTATAA TGCATTTGGG TTTGATCATA
  TGCATGCCCA ATTACTCAGA GGCATAAGAG AGCCAATAGA GAGTCTTCTT GAAATTTTAT
  TTGAGACACA CATTTGAAGG ATTGTGCATA TACCCCAAAC TGTTCAGGCA TTTCTCTTCC
  W
  TAAGGAAGGT ATGATTGAAT AAAATCTGTC TACATCTGAT GATTGTCATG GCGGGGTGGG
  GGGGGAGGAT GGAGAAACTT ATCCTAATGT TCAGAGAGAG GTATATATGT AGCTGGATGC
  AAATGGGGCC TGAGGTTATT GGATGCATTG TTCCAGAGAG GGGTGTTATG TGTAAGTAAA
  AAAGCTGGGC TTCCACTTGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231988	CHEV_4_101671884	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250294254					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101856476 () rs orientation: forward

Symbol	Name	Function Class
Rr376932	regulatory region 376932	998 bp downstream
Rr596214	regulatory region 596214	299 bp distal
Rr596215	regulatory region 596215	535 bp distal