rs250257154 SNP Detail

Summary

• ID
  rs250257154
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107602123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGGAGGA AAAGGAGGAG
  GAGGAGGAAG AGGAGGAAGA GGAGGAAGAA GAGGAGGAGG GAGGAAATCA TCTATTCTGT
  TTCCAAAATG GGAGGCTTGG CCTCCATGTC CCCATGTCTG GAGGTGATGG AAGGGGATTC
  AGGGGCAAAG CAAGCCCTCA TATCAGTTGG CTCCTGCAAG GCTGGAATGA CTTCATAAAG
  Y
  CTATTCGACA CATACTGCTC TCAAAATCTT AAGGCCTTGA GTGAGAATCT AAACGACACA
  GACTTTGAGA TCTTTGGCAA ACTGGGATAT TCCTAGGCTC CACGAGTAGT TGTGCCTCAT
  GGCGACATTA AACTGAAGGT CTCACTTGCC TTGTCCACAG AGTCTGAAAA GCCACCGTGC
  AAACCGGTGT CAGGCAGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250740	CHEV_4_107417531	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250257154					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107602123 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	642 bp downstream
Rr597058	regulatory region 597058	182 bp proximal