About   Help   FAQ
rs250237725 SNP Detail
Summary
  • ID
    rs250237725
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr4:131822696 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      TCCTGGAAG CTTATCAGCT ATGTACTCCT
    GTAGATTCGG AGGACACAGC AAATCCCAAG GCAATTAACT TGGcctttgt cacctagttg
    gtccctgata tgtgtaaaaa aaattcaaaa gatagaaaaa gttgttacaa ggaagaatac
    R
    tcagagctgt tagaaatagc ccagtcggta tttgacgact gagGCAGTAA AGAAGACtgt
    cttagttaaa ggtttctatt gctgtgaaga gacactgttc atagtcacac aagttcaaga
    agcaggaagc agtctaaAGT GTTGGACACA                                 
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss321330502 CHEV_4_131651300 CHEVERUD SCREENING_POP f SNP G A
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs250237725 SNP G A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:131822696 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm13214 predicted gene 13214 1087 bp downstream
Rr600873 regulatory region 600873 1879 bp distal
Rr600874 regulatory region 600874 747 bp distal
Rr600875 regulatory region 600875 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory