rs250198400 SNP Detail

Summary

• ID
  rs250198400
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:135710909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATTTATA GTTTATACTA
  TATTCTTTGG GACAAGAGCT ACGAAACACT ATAGTAGAAA AAATATTTAA AAAAATGAGT
  ATTAGGAAGA ATTGTGTTTC TGTTGCTGCC ACTAAGCAGG ATCAGCACTG TTAATAATTA
  TGTAAGATAT GCTTACAGAC TTGGTACACT TTCAGGCTTT ATGGTTAATA AAGCTTACAA
  A
  GCTTTATTTA ATAATATTTA TTTATTTAAT ATTTAATAAT ATTTATTTAT TTAATATTTA
  ATAATATTAA TATTTAATAA AGCTTACAAA GCTTACAAAA GGCAAAGGAG TGGGCCCTTT
  TACTGAACAA AAACACAACA ATAAGAGAAC AGATACAAGA TTAAAATTAA ACAAAATTTC
  CCAAAGTAAT TGCCAACTAC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	I/LnJ	ZALENDE/EiJ
ss359848599	MGP_WTSI_3_135668112	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	I/LnJ	ZALENDE/EiJ
rs250198400					SNP	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss359848599	MGP_WTSI_3_135668112	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135710909 () rs orientation: forward

Symbol	Name	Function Class
Rr585801	regulatory region 585801	1971 bp proximal