rs250170693 SNP Detail

Summary

• ID
  rs250170693
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:6548015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTTGGTCG CCTGCAAAAT
  CAGAAACCGA GCTCAACAGA AAGTACCTGC CTGACCCGAG CCTCTGCGGG GGCCGCAGGT
  GGGTTAAGAG GAAGGAGGGC AGTTGGCTTC CATGGGGGGA AAAAAAAAAG TCAAGATTTT
  TTTTTGAGAT TTATATCATT AATAACTAAA TAGATTGTGA ACGAGATGGT CTATGAAATA
  Y
  AACTGGTATT CTCTTGTGTT TCTACACGTG TACCTACACA CCACCATAGA GAGACTGAGA
  ATGTGTGTGA TCACTGTTAG TGAGCTGAGT GCTGCAGAAA GTACAAAATA GCCCTCAAGG
  ATGAAGGAAG GCCCCGGCAG TGGTAAACAG TGGGCTAACA CCAATCATGT CACTGGAAGT
  GCGCGTGCTG GAAGGAGGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320211129	CHEV_2_6464250	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250170693					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:6548015 () rs orientation: forward

Symbol	Name	Function Class
Celf2	CUGBP, Elav-like family member 2	mRNA-UTR
Tssr22446	transcription start site region 22446	459 bp upstream
Tssr22447	transcription start site region 22447	773 bp downstream