rs250109018 SNP Detail

Summary

• ID
  rs250109018
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105173434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTCGTTTT TATTTTATGC
  GTATGACACT TTTCCTGCAT ATATGTAAGT GCACTTTGTG TGTGCCTGAC ACTCGTGGAG
  GTCTCAAGTT GCCACCAGAT GCCCTGGACC TGGAGTTAGG GATGGTGTGA AGACATAAAG
  ATTCTGGGAA CTGAACTCTA CTCCTCTGCA AGAGCAGCAC AGGCCCTCAA CCACGGAGCC
  R
  CCTGCCTCTC CAGCTCCATG CTTTTTCCAT GCTTTTTGTG TCCCAGTCGC ATGTAGCCTA
  GGCTGGCTTT GAATTCACCA TATGCCTAAG GCTAGCCTTA GGCTTCCAGC CTTACCTCCA
  AGTGCTGGAA TTGCGGGTGT GCACCACCAC ATTGGGCTTT TAGGTTATTT TGAAGAGCAC
  AAAATTTCAT TCCAAATATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243584	CHEV_4_104988842	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs250109018					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105173434 () rs orientation: forward

Symbol	Name	Function Class
Gm40217	predicted gene, 40217	within coordinates
Rr596595	regulatory region 596595	799 bp distal
Rr596596	regulatory region 596596	348 bp proximal
Rr596597	regulatory region 596597	822 bp proximal