rs249995788 SNP Detail

Summary

• ID
  rs249995788
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131822221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAAAACA AAAGAAAAAT
  GTCTTCAAGA TACCTTGATC TATACTCGTG ACCACCTGCC CCATAATGTA TGACTTCTCT
  TTCACATGAT ATATATTTTT GCCTTTATTT TTACCTTTCA TTGTACTTTC TCTTTCTTTT
  TCTAAAGATT TATTTATTTA CTTTCTGTAT ATGAGCACAC TATCTGTCTT CAGATGCATC
  R
  GATCCCATTA TAGACCTCTA AAACTGGAAA AACCAGTGTC CATGTCCACC CTGACTCCCT
  GATTTCTCTA ATGCTTTTTC AATAACGGCC CCCATTTGGA GTGACACACT AAAGATTCTC
  CTCAGAGGAG AGAGAGCAGA TTCTCATAAA GGCTGCTGAG GCAATCCCTG GAAGAGCCTT
  GGTGCCTGGC AAATTCTCCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321330496	CHEV_4_131650825	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249995788					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131822221 () rs orientation: forward

Symbol	Name	Function Class
Gm13214	predicted gene 13214	612 bp downstream
Rr600873	regulatory region 600873	1404 bp distal
Rr600874	regulatory region 600874	272 bp distal
Rr600875	regulatory region 600875	237 bp proximal