rs249980917 SNP Detail

Summary

• ID
  rs249980917
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:31915642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGGC TCCGAGGTCC CGCAGGTTGC
  T
  CGACAGGAGG CCGAGAGATG GTGCC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323628413	CHEV_11_31865642	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249980917					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:31915642 () rs orientation: forward

Symbol	Name	Function Class
4930524B15Rik	RIKEN cDNA 4930524B15 gene	mRNA-UTR
Gm74092	predicted gene, 74092	151 bp upstream
Rr444466	regulatory region 444466	40 bp distal
Rr444467	regulatory region 444467	891 bp proximal
Tssr100808	transcription start site region 100808	45 bp downstream
Tssr100809	transcription start site region 100809	31 bp downstream