rs249962360 SNP Detail

Summary

• ID
  rs249962360
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:32456643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGT CCCTCCCTAC CCCATCAGGA
  Y
  ATTATGTGGT GGAGTATTTA TAGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321778272	CHEV_6_32429708	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249962360					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32456643 () rs orientation: forward

Symbol	Name	Function Class
Plxna4	plexin A4	Intron
Rr628114	regulatory region 628114	within coordinates
Rr628115	regulatory region 628115	191 bp distal
Rr628116	regulatory region 628116	1083 bp proximal