rs249801107 SNP Detail

Summary

• ID
  rs249801107
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:97949184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACT TTGCTAGACG TGAGGGTGAG
  R
  GTATGATACA CCTGCCCAAG CCATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320844177	CHEV_3_97845791	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249801107					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:97949184 () rs orientation: forward

Symbol	Name	Function Class
Notch2	notch 2	Intron
Rr581620	regulatory region 581620	694 bp distal
Rr581621	regulatory region 581621	450 bp distal
Rr581622	regulatory region 581622	746 bp proximal