rs249732241 SNP Detail

Summary

• ID
  rs249732241
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:21821954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAGCGTCTC TCTGGCAATA AAATTAGTTC
  ATTTCTAGTT ACACGTCACA GTTTTATAAG GAAGGGCTAG ACAAGTTCAA TAAATGTCAA
  AAGAAAGGGA TTTTATTCCT TTATATCTTT ACTTTTCTTA CTTTACTATG AACAATATTT
  W
  AAAAAAAAAC CTTCTCAGGA GACGATATGT GCTTTTTATA TGAAATATTT TAAATACTTT
  TCATTTTTAA GGAAGCTGAC TTTCTAAATA TTTTTTGCCT CTAACTTTTT AAAATCTACT
  GGAATTATAA AAATAATCTT TGCCAACAAA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321763608	CHEV_6_21771955	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249732241					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:21821954 () rs orientation: forward

Symbol	Name	Function Class
Rr627014	regulatory region 627014	669 bp proximal
Tspan12	tetraspanin 12	Intron