rs249636981 SNP Detail

Summary

• ID
  rs249636981
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:75236425 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTT TTTTTCCTGT AATGTCTTCA
  R
  GACATGAACA AGATAATTAG AAGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322267514	CHEV_7_82731563	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249636981					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:75236425 () rs orientation: forward

Symbol	Name	Function Class
Akap13	A kinase anchor protein 13	Intron
Rr400375	regulatory region 400375	1300 bp upstream
Rr649259	regulatory region 649259	962 bp distal
Rr649260	regulatory region 649260	448 bp proximal
Tssr67241	transcription start site region 67241	963 bp downstream
Tssr67242	transcription start site region 67242	489 bp downstream
Tssr67243	transcription start site region 67243	457 bp downstream
Tssr67244	transcription start site region 67244	442 bp downstream
Tssr67245	transcription start site region 67245	405 bp downstream
Tssr67246	transcription start site region 67246	373 bp downstream
Tssr67247	transcription start site region 67247	344 bp downstream
Tssr67248	transcription start site region 67248	301 bp downstream
Tssr67249	transcription start site region 67249	265 bp downstream
Tssr67250	transcription start site region 67250	229 bp downstream
Tssr73048	transcription start site region 73048	1211 bp downstream