rs249553691 SNP Detail

Summary

• ID
  rs249553691
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:4343496 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGCAAAG TGGTTGCTAT
  GGTTACAAGG TCAGGAAATA TGCCTTTTCC CCAGTTGTCC AAGGCTTGCA CATGTCACTT
  TTGAAACTAT GAATTTTATA TACAGGTCAG GAGATGCATA CTAAAAAAAT AAACTGAGAA
  CCAGGCCATT ATGACAACTA ACATCCAAAT GTCCTTGGGT TTTTAAAAAA TAACTAGGAA
  R
  ATACATTGTT ATTTTGAATA AAGTAGGTTT TCATTGTTTC ACATATATGC TATAATAATA
  TATATTGAGT GGCATGTTTT CACGTAATGA GATTTCACTT TGCAGCTTCA AATTATTTCT
  TAATATTCTA AACATACACC AACAATTTGT TTCTTAAATG TTATAATTTT CTCTCTCTAT
  ATATATTATA TTTTAAACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320635458	CHEV_3_4278436	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249553691					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:4343496 () rs orientation: forward

Symbol	Name	Function Class
Rr573153	regulatory region 573153	43 bp distal
Rr573154	regulatory region 573154	1978 bp proximal