rs249432203 SNP Detail

Summary

• ID
  rs249432203
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:24607901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTTAATA ACTCTGTGTC
  AACAAGAACT TGACTTATCG TCTGCCTTGC GATACTTACC AAGGAGTGAG AAAAGGCAGG
  AGGAACACTA CACCATGTAT ACACACATGG AGATGCTTCA AAGACCAGAG TAAATCAGTA
  AGTTCTTGTA AGGATTTCCC AAGAACTTCT TTTTATAAAT AAGCCTCTTG TTGCGCACGC
  G
  CGCGCGCGCG CGCACACATA CACACACACA CACACACACA CACACACACA CGGAGAGTCA
  GTCAGTAAAG TTAACAATCC ATTTCTTCTG TGAGGGGGGT CTTGAGGCAG ACTTTTTATT
  TTTGTTAACC ACCAAGTAAC ATGATATAAA AAGCTAAGAA TTGCTCTGAA CCTCAGAACA
  TTGCCACTGC CATCAATGCT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	CAST/EiJ	CBA/J	CE/J	FVB/NJ	I/LnJ	KK/HlJ	LEWES/EiJ	LP/J	NOD/ShiLtJ	NZW/LacJ	QSi3/Ianm	RIIIS/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss367703214	MGP_WTSI_6_24557902	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	CAST/EiJ	CBA/J	CE/J	FVB/NJ	I/LnJ	KK/HlJ	LEWES/EiJ	LP/J	NOD/ShiLtJ	NZW/LacJ	QSi3/Ianm	RIIIS/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs249432203					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss367703214	MGP_WTSI_6_24557902	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:24607901 () rs orientation: forward

Symbol	Name	Function Class
Rr627250	regulatory region 627250	1265 bp distal
Rr627251	regulatory region 627251	44 bp distal
Rr627252	regulatory region 627252	242 bp proximal