rs249412221 SNP Detail

Summary

• ID
  rs249412221
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109373947 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGACCAG CAAGTCTCAG
  GGGTTCACCT ATCTTTGTAT AGTTTTGGGA TTATAGGCAT ATCCTCATAT AACTTGTTTA
  AAAATGTTTC TTTTCCTTTA TTTTTAGTTT CCTTTATTTT ACAGTATGGG TATTTTGCCT
  GTATGTATGT CTCTGCACCA TGTATGTGCT GTGTCCAAAG AGGCCAGAAG AGTGCATTGG
  G
  TCCTCTGGAA CTGGAGTTAT AGATAGTTGT CAGCCACCAT GTGGACATTG GAAATCAAAC
  CTGAGTCCTC TGGAAGATCA GCCAGTGTTC TTAACTGCTG AGTCATCCAT CTCTCCAGCC
  CTGATGGCAG GCTCTTTGCT TGCTGGGTAT TGAACTCAGA CCCTCATTCT TATGCAGCAA
  GTACTTGACT GACTGAACTA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320869284	CHEV_3_109269549	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249412221					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109373947 () rs orientation: forward

Symbol	Name	Function Class
Rr583417	regulatory region 583417	616 bp proximal
Rr583418	regulatory region 583418	931 bp proximal
Vav3	vav 3 oncogene	Intron