rs249149716 SNP Detail

Summary

• ID
  rs249149716
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113698603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCACCAGAA AATATCTTAA
  CGACCTGCCC GTAGCTATGG AAGAGGAGCT GGGAAATGTA CCTTCATCCT GTCAATAGGA
  GCTGAGAGAG ATTACATGGC TCTAGAAAGG ACAACACCCC ATTCTTAATA AAGCCAAGAC
  CAAAACAGGT GGATGAAATT TCAATGTATG TATTATTAGG GTTCTCTAGA GAAACAAAAC
  T
  GACATAATGA ACATACGTAT ATTAAGGGGA ATTTAGTAGA GTGATTTATA GGCCAACGAT
  GGGTGTCTCC TGACAAAAGG GCCAAGAATC CATTAGTTGC TCAGTCATGA TGTGGGATGT
  CAGATGGTCT TTTGTCAACA TTTGAATCCA GAAGCAGGTT TAACACCAGT GAGCCATGCT
  TTAGCCAAGG GATAGATGAA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911660	CHEV_6_113671636	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249149716					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113698603 () rs orientation: forward

Symbol	Name	Function Class
Ghrl	ghrelin	1762 bp upstream
Rr636588	regulatory region 636588	197 bp distal
Tssr62471	transcription start site region 62471	1759 bp upstream