rs249137747 SNP Detail

Summary

• ID
  rs249137747
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:8639179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCC CTTCCCTCCC CTTTCCTTTC
  G
  CTAGAAAGCA TTGACTCCAT GCCCC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323245282	CHEV_10_8483213	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249137747					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8639179 () rs orientation: forward

Symbol	Name	Function Class
Rr384117	regulatory region 384117	396 bp downstream
Rr427375	regulatory region 427375	1965 bp distal
Rr427376	regulatory region 427376	84 bp distal
Rr427377	regulatory region 427377	89 bp proximal
Sash1	SAM and SH3 domain containing 1	Intron
Tssr3133	transcription start site region 3133	1019 bp upstream
Tssr96640	transcription start site region 96640	1156 bp upstream
Tssr96641	transcription start site region 96641	1132 bp upstream
Tssr96642	transcription start site region 96642	1101 bp upstream
Tssr96643	transcription start site region 96643	1045 bp upstream
Tssr96644	transcription start site region 96644	949 bp upstream
Tssr96645	transcription start site region 96645	799 bp upstream