rs249108389 SNP Detail

Summary

• ID
  rs249108389
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34501375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTGCCAG GCTTTTATTT
  ATAGTCTACA ATAAAGAGAA GCAAGTTATA TTTATTGAGC AAATTGTGTA ATTAAACCAG
  CTCCCAAGGT GTTTTTCATT TTGGAGCTCT GAATTGACTC CAAGGAAAGT TAAACAAGAA
  TTATCATGTT GAAGCAAAAG CTTTGTTTAA GAATAAGCAA GCATAGGTAG GGGCTGAAGA
  R
  CTGGCTTTGC AATCCACTGC ACTTGTTCCC CTTCCAGAGG ACCTGAGTTC GATTCCCAGC
  AACTACATCA AGTGTCTCCC AACCAGTTCC AGAGGATCTG ATGCCTCTTA GGAATCTATA
  CTTGTGTACA TACGCGCATG TGCACACGCA TACACACAGA GACAAAATTA AAAAGTAAGT
  ATTAAAAAGA TATGAGAACG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701776	CHEV_3_34346148	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249108389					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34501375 () rs orientation: forward

Symbol	Name	Function Class
Gm64637	predicted gene, 64637	201 bp downstream
Gm64638	predicted gene, 64638	616 bp upstream
Rr575134	regulatory region 575134	1288 bp distal
Rr575135	regulatory region 575135	420 bp distal