rs249103492 SNP Detail

Summary

• ID
  rs249103492
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22537962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTAAA ATACACCAAG
  GGCCTTTTTC CTGTTGAGGT ACTACAGGTC CAATAGAGAG TCACATGCAT ACTAGGGACC
  ACTCTACCTC TGAGCTGTGT CTTATCCCTT TGTTTTTTAA TAAAGGTTCT TGCTGTGTAA
  CTGTGTAGCC TTAAACTCTT GTTTCTCTTG AGTACTGCGA TCAGAGGTGT GTATCAATAA
  R
  CCTGGCAATA AATACTCTGA GGAGAAAGTA ATCATACTTT AAAGCTTTAC TTTAGGAAAT
  ATTGGGAGCA GCATTGCTGC TCTATACCCT GTAAGGTTGT GCCATCCATG CTGTCTGCAA
  AGGAGCTGAG TGGTCTCTTT GTCTTTCTTT TCTCTTACCT GAGCAGTCTC AAGTCACTTG
  TGCCCCTTCT CTGCAGCATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321765824	CHEV_6_22487963	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249103492					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22537962 () rs orientation: forward

Symbol	Name	Function Class
Rr627119	regulatory region 627119	533 bp distal
Rr627120	regulatory region 627120	477 bp distal