rs249039347 SNP Detail

Summary

• ID
  rs249039347
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:128283819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCGCAAAA TACAGAATGA
  ATGTATATTG TCTGCATGAG GTTGCAGGGG AGATCCCGTG AAGTTGTTTG GACTGCGTCC
  CTGTGAGACT CGTGAGGACC CACTGAGGTT TATGAATAAG GGCCCCAGCA CTTGCATAAA
  CTGGGGTTAC AATCCCCCAC AAGTTACTGT CATGACAAGG ACAATACCTT TCCATCTTTT
  Y
  TTTAAGTCTG GTTTTAAACT CAGAAAAAAA TGAGTCTGAG CTTTCTATAT GATTTTTTTC
  CATATATCAG ACAGATGAAT GGTCATCATT AGGACCTTGT AGAAGGCTCA AAGGAAATTT
  TACCCTAGGG CCTGGGAGCA TTATCTGGAA TTTATTTGGC AATAGTACCA TTTCTTCCAA
  TCCCTCAGCT CCTGTCTGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320502412	CHEV_2_128267635	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs249039347					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:128283819 () rs orientation: forward

Symbol	Name	Function Class
Gm29010	predicted gene 29010	within coordinates
Gm36154	predicted gene, 36154	within coordinates
Rr564741	regulatory region 564741	344 bp distal