rs248978642 SNP Detail

Summary

• ID
  rs248978642
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101260582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACAAAGG CCTCGTGCTG
  ATCACTGGTA GGACAAACTC ACAACCTCCT GTAACTCCAG CTCATGGCAT CCAGCGCCCT
  GTCTGGCCTC TGGGTACCTG AAGGCACATG GCATACAAAC ATACATACAT ACACATCAAT
  AAAAATATTA TTTTTACCTT TGAGGCAGAG TCTCACTACA TAGCCCTGGC TGACTAGGAA
  Y
  TCTATATGTA GACCAGGCTG GCCTAGAATT CACAGAGATC CACCTGCTTC CATCTCTTGA
  GTGCTTGAAA AATACATCTT AAAAAAGAAG ACCTATCCTT GTTCTGAGTA GCTCCATAGT
  GAAGTGTCAC AATGTATGCG GCTTACTTTG AAATACTTTA GCAAAAAAGC ACATGTATAA
  ATATGGCTAC TTATGTGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851917	CHEV_3_101157189	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248978642					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101260582 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	within coordinates
Rr582017	regulatory region 582017	952 bp proximal
Rr582018	regulatory region 582018	1190 bp proximal