rs248926868 SNP Detail

Summary

• ID
  rs248926868
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141949329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCTCTCT GGAATCCTAC
  TGGTACCCAG CAGGTCTGGA TTTTAACAGT CTACAGTCCA GGAAGGGTAG AAGACCTGGG
  ACGCTCTGGG CCTCCTAGGA GTTTTGTGGC TCCAGGGCTC TCTGCTAGGC ACACGGCCAG
  AGAAACTTCC AGTCCCAGAC GGGAGCTGTA ACTAAGTTGA GCAGAGAACC TGCTTGGGTT
  T
  AGTCTCCTGC ACACTGCATA AACTGGGTAT GGAAAAGCGT AACTACAATT CCAGCAGGAG
  AGGTGGAGGC AGGAGAATTA CCCTTCAGTG AGGAAATGAA GGCATGAAGA ATAAAAGCCT
  AGCCCAAGAG TGCAGGCCAA TTAGCGTGGG TCTTTGGTCT TGTTCACCTG GCTGCCAGAT
  TAGTCCCCAC CCCCTGACTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321393902	CHEV_4_141777933	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248926868					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141949329 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kazn	kazrin, periplakin interacting protein			Intron
				Noncoding-Transcript-Variant
Rr604032	regulatory region 604032			within coordinates
Rr604033	regulatory region 604033			1821 bp proximal