rs248902959 SNP Detail

Summary

• ID
  rs248902959
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:107029329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCAGTCAC TTGCCTGCTC
  AAGTTTTATA GCTGACAAGC ATGGCTCCAT CCCTTAAGCA TATGTACAGG GTGGGGTAGA
  AAGTCTACAG ACCAGTCCTT TGCCCAGACA GATATCTGCT GAAGGTTTTC ACTCTGCAAA
  CACTTAAGAC TGTAGCCCTT CATTAGAACA TTTACCACCC TTGAGTGTGC TAATTAGGGA
  K
  TCACAAGAAA GTAATCATTT GCCAAGGTCA CAAACAATAG AGTTAAATGA GGCTCTTGAT
  AGGCAGAAAG AGAGCTATTA AGTAGAGAAG GCTCAGCAGA TATCAGATAC CTGGCCAAAA
  CTCCGAGCAA CACAGGATGG GCCAGAGGAA AGATAACTGC ACACCTTCAG GGGACACCCT
  TCCCTTCTGC ATATTCCATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321888036	CHEV_6_107002362	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248902959					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107029329 () rs orientation: forward

Symbol	Name	Function Class
Rr379902	regulatory region 379902	within coordinates
Rr635986	regulatory region 635986	39 bp distal