rs248850791 SNP Detail

Summary

• ID
  rs248850791
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151865730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAACCGCA TGATGGCTCA
  CAACCATCAA TACAGCTACA GTGTGCTCAA TAAATAAACA AACAAACAAA CAAACAAATC
  TAAAGCGCGT GTTTGTATTC CGGCCAGAGA GATTAAAGGT GTGCGCTAAG GGCTGAGCCA
  CATTATAACT AGAAGCTGGT TTGGTTGTTT TTGTTTTCAG TAAACAACAC AATCTCTGGG
  Y
  GCAACACTAC TCTTCGTTGC TGTGGCATCT CTCCATATCA GGAGTTTGAA CAGCTCTAGA
  TGCTGTCCTA GTCTTACAGA ATCTTATTCT GGACATCTCC TGAAGTCACG CAGCAAGTCA
  GGAACCCATC TTTCTCCTCA CCCCTCTCTG AAGCCTGGGA AGTAGACTCA GGAATGCTCA
  CAGTACCCTG GAATCACTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320561836	CHEV_2_151849546	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248850791					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151865730 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	within coordinates
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567261	regulatory region 567261	1593 bp distal
Rr567262	regulatory region 567262	1397 bp distal
Rr567263	regulatory region 567263	594 bp proximal
Rr567264	regulatory region 567264	791 bp proximal