rs248764162 SNP Detail

Summary

• ID
  rs248764162
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:107347086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGCTCTGG TGCTGGACTG
  GCACGCTGGG CTGTGTGCCT CAGCTGTGAG TGGGGACAGG GGAGGAGAAC AGAACTGCTG
  CAGATCCACC CCCTCTTGCT GCCCTGGGTG CCCCGACCCA CACTGAATCC AAGCTGCAGG
  GCTGCCTGGA GGGTCTGTAA GTTAAAGACT TTCATGTGAC CCTAACACAC CTACCAGGCC
  R
  GGAGGGTGTG ATTTGACTTG GCGGAGTGCT GCCTGCTCAG CTAGAAACCT GCAGCTGAGC
  ACCTGGCATT GCTTCTAGGC GCACGGCTAA GTAAATAGTC CAAGAAGGGG CATTCTGGGT
  ATGAGGGGAG CAGGGTGGCT TTTCTGCAAG GGAACTACAA GCCAGGGAAA GCTTCCCAGA
  GAAGGTGACT TTCTTGAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321248467	CHEV_4_107162494	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248764162					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107347086 () rs orientation: forward

Symbol	Name	Function Class
Glis1	GLIS family zinc finger 1	Intron
Rr597007	regulatory region 597007	135 bp distal