rs248616211 SNP Detail

Summary

• ID
  rs248616211
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132616238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTTTTCG AGACAGGGTT
  TCTCTGTATA GCCCTGGCTG TCCTGGAACT CACTCAGTAG ACCAGGCTGG CCTTGAATTT
  AGAAATCCGC CTGCCTCTGC CTCCCAAGTG CTGGGATTAA AGGCGTGTGC CACCACCGCC
  CAGCTTATTT ATTTATTTTA TGTATATGAA TACACCATAG CTCTCTTTAG ACACACCAGA
  W
  GAGGGCATCA GATCCCATTA CAGATGGTTG TGAGCCACCA TGTGGTTGTT GGGAATTGAA
  CTCAGGTCCT CTGGAAGAGC AGTCAGTGCT CTTAACAGTT GAGCCATCTC TCCAGTCCGA
  TTCTCACTTT CTAAAGCTGC GTTCTGCTAT TTTCTGTTTC CAGCTAATGA CTGTCACAAT
  GCACAAGCAT TACTCTATGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337160	CHEV_4_132444842	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248616211					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132616238 () rs orientation: forward

Symbol	Name	Function Class
Rr601104	regulatory region 601104	1246 bp distal
Rr601105	regulatory region 601105	1062 bp distal
Rr601106	regulatory region 601106	952 bp distal