rs248539962 SNP Detail

Summary

• ID
  rs248539962
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86053022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGTAACTGT TAGCCTGCGT CTGTAACTGT
  GATTAAACAC TTGAGATCAA TCAGCTTaaa gaaagagagg aagagaggaa gagaggaaga
  gaggaagaga ggaagagaga gagagagaga gaaagagaga gagagagaga aacaaagaaa
  S
  aaagaaacaa agaaacaaag aaacaaacaa acTTGGGCCA CAGGTGTCAA AGATTCAGAC
  CATGGCTGAA TGGTCCCATT GCTTTGGGTC TGTGACAGCA TAGTACATCA TGGCATGAGC
  TGTGACAAAG GAGACTGCTT GCCTCATGGC                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321845678	CHEV_6_86026034	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248539962					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86053022 () rs orientation: forward

Symbol	Name	Function Class
Add2	adducin 2	Intron
Rr633328	regulatory region 633328	366 bp proximal
Rr633329	regulatory region 633329	1527 bp proximal
Tssr57448	transcription start site region 57448	1997 bp upstream